Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFLEIAKVYLQGLGLASITVILVGIIWVFWRAKKNIDKTARERQSVLYDVLLIALMTAPILAFAFVAIILMIKA
2RDD Chain:B ((11-33))--------------------VFGLIFYFMIL--RPQQKRTKEHKKLMDS-------------------------


General information:
TITO was launched using:
RESULT:

Template: 2RDD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1826 for 87 contacts (-21.0/contact) +
2D Compatibility (PS) -2360 + (NN) 284 + (LL) 5960
1D Compatibility (HY) -2400 + (ID) 150
Total energy: -492.0 ( -5.66 by residue)
QMean score : 0.444

(partial model without unconserved sides chains):
PDB file : Tito_2RDD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2RDD-query.scw
PDB file : Tito_Scwrl_2RDD.pdb: