Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MASIIYSPKDIFEQDFKVSMRGYDKKEVDVFLDDVIKDYENYLEQIEKLQMENRRLQQALDKKESEASNVRNSGTAMYNQKPIAQSATNFDILKRISRLEKEVFGRQIRE
2WUK Chain:A ((4-47))
------TPNDIHNKTFTKSARGYDEDEVNEFLAQVRKDYEIVLRKKTELEAKVNELDER---------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2WUK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5169 for 194 contacts (-26.6/contact) +
2D Compatibility (PS) -4568 + (NN) 1089 + (LL) 4508
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: -7140.0 ( -36.80 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_2WUK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WUK-query.scw
PDB file :
Tito_Scwrl_2WUK.pdb
: