Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKFQFFLLVEAVVLVMGLMKILSDDWTSFIFILALILLALRFYNNDSRHNFLLTTSLLLLFLIFMLNPYIIAAVVFAVLYVLINHFSQVKKKNRYALIQFKNHQLDVKTTRNQWLGTDQH-ESDF-YDFEDINIIRISGTDTIDLTNVIVSGQDNVIIIQKVFGDTKVLVPLDVAVKADISSVYGSVQYFDFEEYDLRNES--IKLSQEEEYYLLKRVKLVVNTIAGKVEVSRK |
3LDS Chain:A ((479-610)) | --------------------------------------------------------------------------------------FNQRKEHKGYMLAAQRNGEIIKEALHNPNLSVDEPLDVDYRFDFSDEIKEKIKKLSAKSLNEMLFRAQRT-----EVAGMTA-----QINRKALINSLYGALGNVWFRYYDLRNATAITTFGQMALQWIERKVNEYLNEVCGTEGEAFV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LDS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 25770 for 747 contacts (34.5/contact) +
2D Compatibility (PS) -12817 + (NN) -1800 + (LL) 11464
1D Compatibility (HY) -5600 + (ID) 1750
Total energy: 15267.0 ( 20.44 by residue)
QMean score : 0.033
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