Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLNKIILSTAALTALFLGYNSVTADTYNNYQPHRSNNMDLTEEYNYNNQIELQERIKKLNIPFKEKLALLRKVKSRQDSYVLDTLRKEVENKNSEYSELEQEYQRISALIDAKFPQGKSSLAEKLHKELIWDLDGVKYDEGISKRTALKKLEGKINEYTKKYSYLF |
1ZFJ Chain:A ((76-124)) | ------------------------------------------------------------NMSITEQAEEVRKVKRSENGVIIDPFFLTPEHKVSEAEELMQRY-RISGVPIVETLANRKLVGIITNRDMRFISDYNAPISEHMTSEHLVTAAVGTDLETAERILHE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZFJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1681 for 227 contacts (7.4/contact) +
2D Compatibility (PS) -5193 + (NN) -1898 + (LL) 4388
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -5122.0 ( -22.56 by residue)
QMean score : 0.439
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