Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNTETIYKLILKDGLRQIKFKNSHLKLVSSAEEGKRGAIFAYRSKANMIKARGLVLTSMEAVSENQDSFTHWTPNVYRYGSYSDSKRQITRGHSEDNLRQVNTFYIDFDITSSAEEMTSGDILTAAIDLGFMPTLILKSDKGYQAYFVLSEPAYVTSHSQFRVVKVAKAISQNLRNYFSQTLPVDMTCNHFGIARMPRTDNIEFFHADYTYSFQEWLDWSMKQSDIPFPSKKPNLTVISGSEGVKQVDEPWYGLLMREANIKGDKALMGRNNVLFTLALANFSSGVSQSDCEVVLADFNEHLAEPLSQDEFLKVIYSAYSGKYEAANRDYIKLLCKAWVNENLRNSDLFIKQRWYKFKKNRANRKNSHLHEWKADVMAYLEGYFQSDDPFIQTTKKAIREELNIPERSLDKVLKALKAD-NKIFFAVKSGRGGGIRLTSVKAIVLSLIQVKKERQEAYFANVAAFFEESLGFIKRVIEGVKSGLKQAKQLSLFEADIG |
2Y53 Chain:A ((301-362)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AIRRAF-VPEAALEPVLEALKAKLAKI--TVGNPRNDAVRMGSL---------VSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y53.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 184 for 242 contacts (0.8/contact) +
2D Compatibility (PS) -6799 + (NN) -4328 + (LL) 28024
1D Compatibility (HY) -6800 + (ID) 1300
Total energy: 8981.0 ( 37.11 by residue)
QMean score : 0.304
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