Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDMIKRWIEKIKSSAIAKPFVVTKKWFQDNVIKRKLVVFSVLFVAWISLLLGAIYSPQRQTYTDEQLKTKQAFENGTGEMRLSSQTYSPETGIIILQFETKDSTSPVDRGIDTKRLKWNLYAKKKTSQTTMEIIPIVDNKISIIIRNVPEDFGAYAIDITNKTISSSSIDIDVSNPSEEQEKPSKTKDNNTDNVIQFYVTTQSSQLKT--GSLKKVSREEFALSEINEEKDFQTGQIKKLSRSIKQLKTSIEDDESRKSGLLKEAEYLSGEDLESNQKDIATIESNIETKNRSIETATQNIEKVQAKIASLEKKATAIKDGTFEFSNPIETVEMK |
| 4LIN Chain:A ((44-160)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LYVIAQGTDVGAIAGKANEAGQGAYDAQVKNDEQDVE---LADHEARIKQLRIDVDDHESRITANTKAITALNVR-VTTAEGEIASLQTNVSALDGRVTTAENNISALQADVDDHESRITANTKAITALNVRVTTAEGE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4LIN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 25911 for 461 contacts (56.2/contact) +
2D Compatibility (PS) -12381 + (NN) -1667 + (LL) 13880
1D Compatibility (HY) -4000 + (ID) 1450
Total energy: 20293.0 ( 44.02 by residue)
QMean score : 0.419
|
|
|