Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKQNNRMTIYYKEENLKKYEALKSFFEADEHISSMTTSATFLFLVDICYQLFIESNSGQSYSERLKQFLNSKNSDVEELKNKVKLVSRQLDQLLYLELTNFHALTKGNDFDIQDLESVHSRFDPMQHELIARIDDIIKEDVARGQAMKHSH
1JI5 Chain:A ((15-61))
---------------------------------------------------------------------------------------------VLFTKLHNFHWYVKGPQFF-----TLHEKFEELYTESATHIDEIAERILAIGGKPVATM
General information:
TITO was launched using:
RESULT:
Template:
1JI5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10515 for 241 contacts (-43.6/contact) +
2D Compatibility (PS) -5052 + (NN) -1524 + (LL) 7792
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -13699.0 ( -56.84 by residue)
QMean score : 0.391
(partial model without unconserved sides chains):
PDB file :
Tito_1JI5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JI5-query.scw
PDB file :
Tito_Scwrl_1JI5.pdb
: