Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVTVILAEKETQAAAYAESLGPASKKGKVHIIKHTPYFSDEVHVIAAEGHLFEYGLPKD------NWDLDKLPLVDVSFKQTLKQDKVSKE--IFKQIYQEVTAADQVIIGTDSDREGERIAYSILSHI---PEGKNKVTKRLWVNSLTTRALQKAFQNLREPIETYNYYLEAEARAQSDWLVGMNLSPLVTLELQKRGRLPKGKGNSLSVGRVQTPGVRLICENDLAIQNFRPETYWKLQLQ------DKETEISFSNK--EKYSDSELILAQARQLKAI--------SIVSSVEMEEKQRAAPHLFNLSDIQGLAAKQWGFEPTKTERLIESLY-LKKYLSYPRTDTRFITEEEFDYLKNYLKSYQEVINC-SFEAVNLEPRENYVNPEKVAKT-------SHYALIPTENIPNLVTLKPDERLIYEAVVRRTLLMFAADCRYSTTTVEVENQGLVFKTTGRQMFDPGWAAFSQQKLKGD----IELPDYRVGDQIET-KVIIVEGMTKPPKRITESQLISDI--LPKY--------------GLGTQATRATMLQTIQDRGYITKDKKTGQLFPTNKAYLLIHYLYDNEFAS-PETTGGWELFLSQIGEGEINPREFVDAIKEKLAAQIAVVKERSD |
1D6M Chain:A ((3-592)) | ---LFIAEKPSLARAIADVLPKPHRKGDGFI-----ECGNGQVVTWCIGHLLEQAQPDAYDSRYARWNLADLPIVPEKW-QLQPRPSVTKQLNVIKRFLHE---ASEIVHAGDPDREGQLLVDEVLDYLQLAPEKRQQV-QRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRAYTI----LG-------GVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVKAHIVTPADERFTAIWQPSEACEPYQDEEGRLLHRPLAEHVVNRISGQPAIVTSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYETHKLITYPRSDCRYLPEEHF-------AGRHAVMNAISVHAPDLLP-QPVVDPDIRNRCWDDKKVDAHHAIIPTAR-SSAINLTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFLAEAGWRTLLGSKERDEENDGTPLPVVAKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQDKDLKKILRATDGLGTEATRAGIIELLFKRGFLT--KKGRYIHSTDAGKALFHSL--PEMATRPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLYQLIDQAKRT-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1D6M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -151106 for 4135 contacts (-36.5/contact) +
2D Compatibility (PS) -55746 + (NN) -11715 + (LL) 2384
1D Compatibility (HY) -34400 + (ID) 8350
Total energy: -258933.0 ( -62.62 by residue)
QMean score : 0.421
|
|
|