Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKMKKWFGLLFLGLALITLAACGQKTPEDIIKTELKDSYVGYSENPGSDYPFNDGDDVLTFNKKENSITNSQGQMTYFSVIPKEE--VPAGTQRVIDELETKLKGTNNFTIIINSTVKNPTKKDSEGAYQIALSDSGKAIRIFELGREPRSFGYYDFSGKAK |
2JSY Chain:A ((29-82)) | ---------------------------------------------------------VLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKLGDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYIKELRLLARSVFV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JSY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4930 for 261 contacts (18.9/contact) +
2D Compatibility (PS) -5551 + (NN) -309 + (LL) 2588
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -3292.0 ( -12.61 by residue)
QMean score : 0.348
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