Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEWIKENMIYVIAIGLLLIFSGVAVYRSVTQNKSQSPQVEHMKPLDSSSSSMDESE---TTDEKNY---RTAKLKLEHPYSESSEEQKQEVRKAFDEAIKAIQQANHLTEVKGTLDNHLSMSQDGMIQTLAMAILVNQYSYQSSKLEVTPSENEDVVQFLIVLTKQGEDSCYFVGNFNTTVSQIQLKAYVGGNIGGTFG |
3TOC Chain:A ((21-126)) | ---------------GTILVLEDVCVFSKIVQYCYQYE--SELKFF---MKTIKESEIMLVTDILGFDVNSSTILKLIHADLESQFNEKPEVKSMIDKLVATITELI----VFECLENELDLEYDEITILELIKSLGVKVETQSDTIFEKCLEILQIFKYLTKKKLLIFVNSGAFLTKDEVASLQEYISLTNLTVLFLEP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TOC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 19507 for 380 contacts (51.3/contact) +
2D Compatibility (PS) -10389 + (NN) -4516 + (LL) 2628
1D Compatibility (HY) -8000 + (ID) 1400
Total energy: -2170.0 ( -5.71 by residue)
QMean score : 0.382
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