Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDNRFAQLKENFEKGSPKRRVPTSRPIAAQKAPESYNKKGRYPFSLHQDVRYDKLEALVAYHGAKSASDYLERLIVQEWEKMQRKLKNKEK
4REU Chain:A ((17-55))
----------------------------------------------LYSSLLYQQMSAWCSYHTFEGAAAFLRRHAQEEMTHMQRLFDYLTD
General information:
TITO was launched using:
RESULT:
Template:
4REU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2266 for 233 contacts (-9.7/contact) +
2D Compatibility (PS) -4295 + (NN) -2148 + (LL) 2004
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -10505.0 ( -45.09 by residue)
QMean score : 0.286
(partial model without unconserved sides chains):
PDB file :
Tito_4REU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4REU-query.scw
PDB file :
Tito_Scwrl_4REU.pdb
: