Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIANQTIVDIVTQVVTPAIQAPFELVDVEYEKMGGDYVLSILIDKPGGITVEDTAQLTDVVSPLLDTIQPDPFPEQYMLEVSSPGLERPLKTAEALSNAVGSYINVSLYKSIDKVKIFEGDLLSFDGETLTIDYMDKTRHKTVDIPYQTVAKARLAVKL
1IB8 Chain:A ((6-162))
--AIATIVELVREVVEPVIEAPFELVDIEYGKIGSDMILSIFVDKPEGITLNDTADLTEMISPVLDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLAFEEDELTMEYMDKTRKKTVQIPYSLVSKARLAVKL
General information:
TITO was launched using:
RESULT:
Template:
1IB8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97904 for 1012 contacts (-96.7/contact) +
2D Compatibility (PS) -16202 + (NN) -4129 + (LL) 412
1D Compatibility (HY) -22800 + (ID) 5150
Total energy: -145773.0 ( -144.04 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_1IB8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IB8-query.scw
PDB file :
Tito_Scwrl_1IB8.pdb
: