Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLQENKTAIFDNVSKLALKAGRAPESVHIVAVTKYVNCQTTEALIRTGVNHIGENRVDKFLEK---YQALKDEKLTWHLIGSLQRRKVKDVINYVDYFHALDSVKLAAEI--QKRAQ-KPVKCFLQVNISREDSKHGFTIEQIDDALNLISRYDKIELIGIMTMAPLKATKEEISSIFEETESLRKRLQARNIERMPFTELSMGMSRDYDIAIQNGSTFVRIGTSFFK
1W8G Chain:A ((3-226))
-DIAHNLAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLVAEHFDWCHTIDRLRIATRLNDQRPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAELPRLRLRGLMA---IPAPESEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTMVRIGTAIFG
General information:
TITO was launched using:
RESULT:
Template:
1W8G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130642 for 1756 contacts (-74.4/contact) +
2D Compatibility (PS) -23566 + (NN) -8927 + (LL) 420
1D Compatibility (HY) -15200 + (ID) 3450
Total energy: -181365.0 ( -103.28 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_1W8G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W8G-query.scw
PDB file :
Tito_Scwrl_1W8G.pdb
: