Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEKAILLIILIAFVIIAIIKIALLKLYMNTIKPKVDNEGNIITKPVKDDLTPEEREEREFDKDW
3RPJ Chain:A ((49-60))
-----------------------------------------------------VTPEKREFWGWW
General information:
TITO was launched using:
RESULT:
Template:
3RPJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2546 for 28 contacts (90.9/contact) +
2D Compatibility (PS) -1075 + (NN) 464 + (LL) 5196
1D Compatibility (HY) -800 + (ID) 250
Total energy: 6081.0 ( 217.18 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_3RPJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RPJ-query.scw
PDB file :
Tito_Scwrl_3RPJ.pdb
: