Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTGIIEEMGQVSRIRNGIKSQ-QLSIDAPKLVPLLRKGDSVAVNGVCLTVLDKSETAFIADVMPESMMRTSLAALRLHSKVNLELALRSDSRLGGHFVLGHVDGVGKIEKIQKDDIAVRFSIDA-PPSIMSYIIEKGSVALDGISLTVVSFTEHSFEVSVIPHTMAQTNLSLKKVGDLLNIEVDVLGKYAEKFLAPTNRTNHTSSVMDWSFLSENGY
1KZL Chain:A ((1-202))
MFTGLVEAIGVVKDVQGTIDNGFAMKIEAPQILDDCHTGDSIAVNGTCLTVTDFDRYHFTVGIAPESLRLTNLGQCKAGDPVNLERAVLSSTRMGGHFVQGHVDTVAEIVEKKQDGEAIDFTFRPRDPFVLKYIVYKGYIALDGTSLTITHVDDSTFSIMMISYTQSKVIMAKKNVGDLVNVEVDQIGKYTEKLVE--------AHIADW--------
General information:
TITO was launched using:
RESULT:
Template:
1KZL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109025 for 1548 contacts (-70.4/contact) +
2D Compatibility (PS) -20887 + (NN) 1589 + (LL) 196
1D Compatibility (HY) -17600 + (ID) 4050
Total energy: -149777.0 ( -96.76 by residue)
QMean score : 0.460
(partial model without unconserved sides chains):
PDB file :
Tito_1KZL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KZL-query.scw
PDB file :
Tito_Scwrl_1KZL.pdb
: