Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNYRKLIVLLLLTFFVIFMGAYAYTHIVEKRSLTSNTIEKTLPVVNQIKPQTIKEYQNYLTKVAKRNVLPVDIPQALN-NEKVEITATDGMQTFTWNDKNNPKQKVIFYVHGGSYIHQASELQYIFVNKLAKKLDAKVVFPIYPKAPTYNYSDAIPKIKKLYQNTLASVTSPKQIILVGESAGGGLALGLADNLVTEHIKQPKEIILISPWLDIATNNPKI-EKVQKKDPLLKAWQLQQVAPYWANGKKNFKNPQVSPLYSSQFNKMAPISFFIGTHDIFYPDNQLLHQKLAKENIKHHYIVGQKMNHVYPVLPIPEAETAFKQMLKIINH
3D7R Chain:A ((67-319))--------------------------------------------------------------------------PSTLNVKANLEKLSLDDMQVFRFNFRHQIDKKIL-YIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFHIDDTFQAIQRVY-DQLVSEVGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDALIEQDAVLSQFGVNEIMKKWANGLP-LTDKRISPI-NGTIEGLPPVYMFGGGREMTHPDMKLFEQMMLQHHQYIEFYDYPKMVHDFPIYPIRQSHKAIKQIAKSIDE


General information:
TITO was launched using:
RESULT:

Template: 3D7R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127527 for 2155 contacts (-59.2/contact) +
2D Compatibility (PS) -26892 + (NN) -17675 + (LL) 7284
1D Compatibility (HY) -21600 + (ID) 3600
Total energy: -190010.0 ( -88.17 by residue)
QMean score : 0.561

(partial model without unconserved sides chains):
PDB file : Tito_3D7R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3D7R-query.scw
PDB file : Tito_Scwrl_3D7R.pdb: