Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKKLIIGIFSLIIIAILAWQGFSFLKHKEIKLQQAVVEKEIRIAEKTVEVVKRQKTERVLFLEPKGYDKSLSADILKWNQKSFEHKKFYDNQYIILRPQLADSNFANVKKLSIYQILYQKEKGSMFQKSSRLLRTYLLDQNKKPFELDELLAHNISGFKAILENIAPGTQLKEHDSNKEFLKTGRVTDGLDVKDGKLIINDLKLPLDKLYNVIDESYLKSSDLDLVSNLKAKAPRVALTFDDGPNEKTTPKALEILKRYNAKATFFVMGQSAVGHTDILQRMHAEGHEIGNHTWDHPNLTKLPAEKIKEEIHKTNDLIMKATGQKPVYLRPPYGATNATVKTVT---GLKEMLWSVDTEDWKNHNTQAMMTN----IKKQLRPGG-VILMHDIHQTSIDALP-TIMDYLITQGYYFVTVGELYSTP
2Y8U Chain:A ((35-220))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IALTFDDGPSEYT-PQLLDLLSRYSARATFFVLGDAAAQNPGLLQRMRDEGHQVGAHTYDHVSLPSLGYDGIASQMTRLEEVIRPALGVAPAYMRPPYLETNELVLQVMRDLDYRVISASVDTKDYENQDADAIINTSFQLFLDQLDAGGNIVLAHDIHYWTVASLAERMLQEVNARGLIATTVGDCLGDG


General information:
TITO was launched using:
RESULT:

Template: 2Y8U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -79903 for 1461 contacts (-54.7/contact) +
2D Compatibility (PS) -19018 + (NN) -7315 + (LL) 18444
1D Compatibility (HY) -15200 + (ID) 3600
Total energy: -106592.0 ( -72.96 by residue)
QMean score : 0.406

(partial model without unconserved sides chains):
PDB file : Tito_2Y8U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Y8U-query.scw
PDB file : Tito_Scwrl_2Y8U.pdb: