Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLRSKFDEELDKLHNQFYAMGIEAIGQIKKTVRAFVSHDRELAKEVIEDDVTLNNFETKLEKKSLEIIALQQPVSQDLRTVITVLKATSDVERMGDHAAAVAKATIRMKGEERIPAVELEINNMGKAVKNMLEEALTAYINGDDEKAYEVAAMDEIVDDYFRDIQKMVVETIQKHPDVAFAAKEYFQVLMHLERIGDYGKNICEWIVYLKTGKIIEL
2I0M Chain:A ((4-215))
----QFDLELHELEQSFLGLGQLVLETASKALLALASKDKEMAELIINKDHAINQGQSAIELTCARLLAL--PQVSDLRFVISIMSSCSDLERMGDHMAGIAKAVLQLKENQLA--EE-QLHQMGKLSLSMLADLLVAFPLHQASKAISIAQKDEQIDQYYYALSKEIIGLMKDQE-SIPNGTQYLYIIGHLERFADYIANICERLVYLETGELVDL
General information:
TITO was launched using:
RESULT:
Template:
2I0M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84711 for 1583 contacts (-53.5/contact) +
2D Compatibility (PS) -22423 + (NN) -14316 + (LL) 800
1D Compatibility (HY) -16000 + (ID) 3550
Total energy: -140200.0 ( -88.57 by residue)
QMean score : 0.616
(partial model without unconserved sides chains):
PDB file :
Tito_2I0M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I0M-query.scw
PDB file :
Tito_Scwrl_2I0M.pdb
: