Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQIIKRDGQIVEFDPEKIYQAILKAAQTVYVLDES--LRQDLAQVTKKVILDLEDA-QVERPTINM--IQSLVENRLLDAGYIHTAEHYISYRLQRDLERNGYDDQITVHLHFEKIK
1O0X Chain:A ((92-180))
-----KEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTREV---LEKAIKMIKPGIRLGDVSHCIQETVESVGF-NVIRDYVGHGVGRELHEDPQIPNYGTPGTGVVLR
General information:
TITO was launched using:
RESULT:
Template:
1O0X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14986 for 424 contacts (-35.3/contact) +
2D Compatibility (PS) -9409 + (NN) -3753 + (LL) 1308
1D Compatibility (HY) -8800 + (ID) 1100
Total energy: -36740.0 ( -86.65 by residue)
QMean score : 0.135
(partial model without unconserved sides chains):
PDB file :
Tito_1O0X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O0X-query.scw
PDB file :
Tito_Scwrl_1O0X.pdb
: