Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKRITLAVTGSISAYKAADLTSQLTKIGYDVHIIMTQAATEFITPLTLQV-LSKNPIHLDVMDEHNPKIINHIELAKRTDLFIVAPASANTIAHLAYGFADNIVTSVALAMPDETPKLIAPAMNTKMYHNTITQRNIDILKKIGYQEIEPRISLLACGDTGQGALADISTILKCIQEVAN
1QZU Chain:A ((22-196))
----VLVGVTGSVAALKLPLLVSKLL--GLEVAVVTTERAKHFYSPQDIPVTLYSDADEWEMWKSRSDPVL-HIDLRRWADLLLVAPLDANTLGKVASGICDNLLTCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQVDQLKAFGYVEIP------------------VGTIVDKVKEV--
General information:
TITO was launched using:
RESULT:
Template:
1QZU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143463 for 1199 contacts (-119.7/contact) +
2D Compatibility (PS) -15975 + (NN) -1665 + (LL) 1484
1D Compatibility (HY) -17200 + (ID) 2750
Total energy: -179569.0 ( -149.77 by residue)
QMean score : 0.456
(partial model without unconserved sides chains):
PDB file :
Tito_1QZU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QZU-query.scw
PDB file :
Tito_Scwrl_1QZU.pdb
: