Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLIGIVGTNSNKSTNRQLLQYMQQHFADKAEIELIEVKDLPLFNKPADKNVPQVILDIAAKIEEADGVIIGTPEYDHSIPSALMSVLAWLS--YGIYPLLNKPVMITGASYGTLGSSRAQLQLRQILNAPELKASVLPDEFLLSHSLQAFDKDGNLHDIETSQKLDAIFDDFRLFVKITGKLSNARDLLQKEAENFDWESL
3U7R Chain:A ((9-182))
------VGSLRKDSLNHKLMKVLQKLAEGRLEFHLLHIGDLPHYNDDLWADAPESVLRLKDRIEHSDAVLAITPEYNRSYPGMIKNAIDWATRPYGQNSWKGKPAAVIGTSPGVIGAALAQARLKNDLLHVGTVMMSMPEAYIQWHA-EAYAADGSVTDEKTAKFLQGFVDAFVDWIEKHGL--------------------
General information:
TITO was launched using:
RESULT:
Template:
3U7R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81813 for 1304 contacts (-62.7/contact) +
2D Compatibility (PS) -18965 + (NN) -10619 + (LL) 2256
1D Compatibility (HY) -6800 + (ID) 2400
Total energy: -118341.0 ( -90.75 by residue)
QMean score : 0.564
(partial model without unconserved sides chains):
PDB file :
Tito_3U7R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3U7R-query.scw
PDB file :
Tito_Scwrl_3U7R.pdb
: