Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPQTLRRLDVKKQFIEKIEPFAHRQTLKSKAVNSSKTTMSIQRYNHSGTKIQ---LRIGYSKVLIRIFSNGKINLTHYDLFFDREETLEIT-DAFDNGVYTQDEVDGFIKQAKTFIKQALKGEV
4OYT Chain:A ((69-153))
--------------FIDKIEELCQKRALEAFNVSDEEWGVNVQPLSGSAANVQALYALVGVKGKIMGMHLCSGGHLTHG--FFDEKKKVSITSDMFESKLYKCNSQGYVDLDAVREMALSFKPKV
General information:
TITO was launched using:
RESULT:
Template:
4OYT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9753 for 444 contacts (-22.0/contact) +
2D Compatibility (PS) -8223 + (NN) 2694 + (LL) 1308
1D Compatibility (HY) -7200 + (ID) 1100
Total energy: -22274.0 ( -50.17 by residue)
QMean score : 0.198
(partial model without unconserved sides chains):
PDB file :
Tito_4OYT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OYT-query.scw
PDB file :
Tito_Scwrl_4OYT.pdb
: