Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIDTFKVKWFKRGMSLLVLILVFFLGLGFGQMGNS-SQSKDRPKQTATKKTRTNTITQTQVKEFLVAYYTKKDLE-ENRNRYKDYMTEGLYNATISEENKAQNQAYRGFVVNFEFQDANIYIDQVHKQVICEVTYTNDLLQKKNNKDGAQIGVVNHTTIQLAYTKLNGKYLINQMSTILLTDSANPSEETESYGAIAPSNTKD |
4QJY Chain:A ((309-370)) | -------------------------GVGSSAFGESFTFDFDLPNDTAYAET---------CASIALVFWTRRMLELEMDGKYADVMERALYNGTISGMDLDGKKFFYVNPLEVWPKACERHDKRHVKPVRQKWFSCACCPPNLARLIASIGHYIYLQTSDALFVHLYVGSDIQTEIDGRSVKIMQETNYPWDGTVRLTVSPES |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QJY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14531 for 337 contacts (43.1/contact) +
2D Compatibility (PS) -6405 + (NN) -2748 + (LL) 3704
1D Compatibility (HY) -4800 + (ID) 1100
Total energy: 3182.0 ( 9.44 by residue)
QMean score : 0.496
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