Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKFEKRQVYYVVITFAICYAIQAYWGAVSNILTTLHKAIFPFLMGAGIAYIINIVMSVYERLYIKLFKGSRLLMAIKRSVSMILSYATFIGLIVWLFSIVIPDLISSLSSLLVIDTGALAKLVNNLNENKQISEALNYMGTDKDLVSTLSGYSQQILKQVLSVLTNLLTSVSSIAATLLNVFVSFIFSIYVLANKEQLGRQFNLLIDTYLGSTGKTFHYVRHIL--HQRFHGFFVSQTLEAMILGSLTVIGMLIFQFPYALTVGVLVAFTALIPVVGAYIGVTIGFILIATESLTEAFLFVLFLILLQQFEGNVIYPKVVGGSIGLPSMWVLTAITIGGALWGILGMLLAVPVAATIYQIVKDHIIKRQTLRNRARTYR
3IBD Chain:A ((348-438))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPVAPEDIDLTPQECGVGKIPPTYQIRFLPRH----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3IBD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50678 for 432 contacts (-117.3/contact) +
2D Compatibility (PS) -8980 + (NN) 1983 + (LL) 21872
1D Compatibility (HY) -5600 + (ID) 1100
Total energy: -42503.0 ( -98.39 by residue)
QMean score : -0.209

(partial model without unconserved sides chains):
PDB file : Tito_3IBD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3IBD-query.scw
PDB file : Tito_Scwrl_3IBD.pdb: