Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYQEALEWIHSKLAFGIKPGLERMRWMLEQLGNPQNNLSAIHVVGTNGKGSTTSYLQHIFTNSGYQVGTFTSPYIVDFRERISIDGQMIPESDFIKLVETVRPVVERLHLETNLEPATEFEVITVLMFYYFGNSCPVDIVIIEAGMGGYYDSTNMFKALAVTCPSIGLDHQEVLGRTYVDIAEQKVGVLKKGVPFVYANDRQDVEEVFQIKAKETHSQTYRLHNDFYIKEEE-----NYFNYIGPQANIDHIQLQMPGHHQVSNASIAITTSLLL--RDKYPKLTLQTIKDGLEMTKWVGRTELI--FPNVMIDGAHNNESVDALVQVIKKYQQKNVHILFAAINTKPIESMLESLSS------IAPVSVTSFDYPKSINLDKYPKAYTRVSD-WKKWL-HDINLTSDKDFYVITGSLYFISQVRQELLLIKTTTT |
| 1FGS Chain:A ((1-424)) | MNYTETVAYIHSFPRLA--GDHRRILTLLHALGNPQQQGRYIHVTGTNGKGSAANAIAHVLEASGLTVGLYTSPFIMRFNERIMIDHEPIPDAALVNAVAFVRAALERLQQQQADFNVTEFEFITALAYWYF-RQRQVDVAVIEVG-----DSTNVITPVVSVLTEVALD-------TITAIAKHKAGIIKRGIPVVTGNLVPDAAAVVAAKVATTGSQWLRFDRDFSVPKAKLHGWGQRFTYEDQDGRISDLEVPLVGDYQQRNMAIAIQTAKVYAKQTEWP-LTPQNIRQGLAASHWPARLEKISDTPLIVIDGAHNPDGINGLITALKQLFSQPITVIAG------YAAMADRLTAAFSTVYLVPVPGT----PR-----------GRLKDSWQEALAASLNDVPDQPI-VITGSLYLASAVRQTLLG------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -261883 for 3159 contacts (-82.9/contact) +
2D Compatibility (PS) -40294 + (NN) -14154 + (LL) 2340
1D Compatibility (HY) -27600 + (ID) 7000
Total energy: -348591.0 ( -110.35 by residue)
QMean score : 0.546
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