Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVLTEQKRKYMEKLSDENGIISALAFDQRGALKRLMAQYQEAEPTVEQMEDLKVLVAEELTPYASSMLLDPEYGLPATKALDKNAGLLLAYEKTGYDTSSTKRLPDCLDVWSAKRIKEQGSDAVKFLLYYDVDSSDELNQQKQAYIERVGSECVAEDIPFFLEILAYDEKIADAGSAEYAKVKPRKVIEAMKVFSDSRFNIDVLKVEVPVNVKYVEGFGDGEVIHTRGEAAAFFKQQDEATNLPYIYLSAGVAAKLFQETLIFAHESGANFNGVLCGRATWAGSVKEYIEQGEEAARQWLRTTGYQNIEELNQVLKQTATSWKERV |
| 3MHF Chain:A ((3-324)) | -TLTENKRKSMEKLS-VDGVISALAFDQRGALKRMMAQHQTKEPTVEQIEELKSLVSEELTPFASSILLDPEYGLPASRVRSEEAGLLLAYEKTGYDATTTSRLPDCLDVWSAKRIKEAGAEAVKFLLYYDIDGDQDVNEQKKAYIERIGSECRAEDIPFYLEILTYDEKIADNASPEFAKVKAHKVNEAMKVFSKERFGVDVLKVEVPVNMKFVEGFADGEVLFTKEEAAQAFRDQEASTDLPYIYLSAGVSAKLFQDTLVFAAESGAKFNGVLCGRATWAGSVKVYIEEGPQAAREWLRTEGFKNIDELNKVLDKTASPWTE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MHF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137822 for 2787 contacts (-49.5/contact) +
2D Compatibility (PS) -34991 + (NN) -13034 + (LL) 424
1D Compatibility (HY) -36800 + (ID) 11700
Total energy: -233923.0 ( -83.93 by residue)
QMean score : 0.584
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