Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLAEYSEAEFQKALRRNIRALTRGKTISSTPKAVLLGGQSGAGKTTIHRIKQKEFQGNIIIIDGDSFRSQHPNYLALQEEYGKYSVDYTKDFAGKMVEHLIGGLSKQSYHLLIEGTLRTTEVPRKTAQLLKSRGYQVSLALIATKPELSYLSTLIRYEELYAIDPNQARATPKEYHDGIVEHLVDNLRELENDKLFNRIQIYQRDRHCVYDSETDKGIAAEVLQECLFGKWSKVEEEMLRVGQERLRELSMRTPK
2P5T Chain:B ((3-250))
--IQDYTDSEFKHALARNLRSLTRGKKSSKQPIAILLGGQSGAGKTTIHRIKQKEFQGNIVIIDGDSFRSQHPHYLELQQEYGKDSVEYTKDFAGKMVESLVTKLSSLGYNLLIEGTLRTVDVPKKTAQLLKNKGYEVQLALIATKPELSYLSTLIRYEELYIINPNQ-------HHDFIVNHLVDNTRKLEELAIFERIQIYQRDRSCVYDSKENTTSAADVLQELFFGEWSQVEKEMLQVGEKRLNELLEK---
General information:
TITO was launched using:
RESULT:
Template:
2P5T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87830 for 1823 contacts (-48.2/contact) +
2D Compatibility (PS) -26588 + (NN) -15537 + (LL) 1008
1D Compatibility (HY) -28400 + (ID) 8700
Total energy: -166047.0 ( -91.08 by residue)
QMean score : 0.561
(partial model without unconserved sides chains):
PDB file :
Tito_2P5T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P5T-query.scw
PDB file :
Tito_Scwrl_2P5T.pdb
: