Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKIILKSSVLGLVAGTSIMFSSAFADQVGVQVIGVNDFHGALDNTGTANMPDGKVTNAGTAAQLDAYIDDAQKDFKQTNPNGESIRVQAGDMVGASPANSGLLQDEPTVKTFNAMNVEYGTLGNHEFDEGLAEYNRIVTGKAPAPDSNINNITKSYPHEAAKQEIVVANVIDKVNKQIPYNWKPYAIKNIPVNNKSVNVGFIGIVTKDIPNLVLRKNYEQYEFLDEAETIVKYAKELQAKNVKAIVVLAHVPATSKDDIAEGEAAEMMKKVNQLFPENSVDIVFAGHNHQYTNGLVGK-------------------TRIVQALSQGKAYA------DVRG-VLDTDTQDFIETPSAKVVAVAPGKKTGSADIQAIVDQANTIVKQVTEAKIGTAEVSGMITRSVDQDNVSPVGSLITEAQLAIARKSWPDIDFAMTNNGGIRADLLIKPDGTITWGAAQAVQPFGNILQVVEITGRDLYKALN---EQYDQKQNFFLQIAGLRYTYTDNKEGGEETPFKVVKAYKSNGEEINPDAKYKLVINDFLFGGGDGFASFRNAK--LLGAINPDTEVFMAYITDLEKAGKKVSVPNNKPKIYVTMKMVNETITQNDGTHSIIKKLYLDRQGNIVAQEIVSDTLNQTKSKSTKINPVTTIHKKQLHQFTAINPMRNYGKPSNSTTVKSKQLPKTNSEYGQSFLMSVFGVGLIGIALNTKKKHMK |
| 2Z1A Chain:A ((112-518)) | --------------------------------------------------------------------------------------------------------------------------ALGNHEFDLG------------PGPLADF--------LKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGI----IGLTTPDTREI--SNPGPTVAFLDPYESAQKAVYELLAKGVNKIVVLSH--------LGYGEDLKLARRLV------GVQVIVGGHSHTLLGSFPHKELSPAGPYPTVVKNPEGKDVLVVQAWEWGKVVGLLEVTFDAKGELLAYKGEALLMTPEA-----APEDFFAKEALLAYAQPVMALMQQV----IAEAKVDLVGERAVVRRRESNLGNLITDGMLWKTRNAGTQI--ALQNGGGIRASI---PKGPITVGKVYEVLPFGNTLVVMDLKGKEILAALENGVSQWENTAGRFLQVSGLRYAFDLSRPAGSRVVRVEVKTEKGY-VPLDLEATYRVVVNNFIANGGDGFTVLKEAQGYRVDTGFSDAESFMDYLKELKVVEAGLEGRIEVLNEP------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109763 for 2941 contacts (-37.3/contact) +
2D Compatibility (PS) -40399 + (NN) -13980 + (LL) 16384
1D Compatibility (HY) -25600 + (ID) 6200
Total energy: -179558.0 ( -61.05 by residue)
QMean score : 0.410
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