Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVTIKDVAAKAGVNPSTVSRVLKDNASISSKTKERVKKAMEELGYVPNVAAQMLASGLTQNIGVIFPPLVLPDRLSEPFFMEILSTLTNEAKEHGFTVSIATSMSSEELLEQVKLMHLQKRVDGFIVLYSDQKDPIREYLLKYKLPFVVVGAANGYENEITYIDNDNQLMGKSAIDYLYKKGHKSIQFVTDDLNSEVSEERYLGYFKGARKLG---LNQKPALLFD---RGNPQVLEEFINRVKEEETTALIVIGDTVSVRVMQFLSFYKLKVPDDISIMTFNNSLFSHLIHPYLSTFDINVNNLGRTSVRRLIDIIKSPDKVFSETIIVPFTLEERESVRDISKNNN |
3K4H Chain:A ((7-284)) | ---------------------------------------------------------TTKTLGLVMPSSA-SKAFQNPFFPEVIRGISSFAHVEGYALYMSTGETEEEIFNGVVKMVQGRQIGGIILLYSRENDRIIQYLHEQNFPFVLIGKPYDRKDEITYVDNDNYTAAREVAEYLISLGHKQIAFIGGGSDLLVTRDRLAGM-SDALKLADIVLPKEYILHFDFSRESGQQAVEELMGL--QQPPTAIMATDDLIGLGVLSALSKKGFVVPKDVSIVSFNNALLSEIASPPLSTVDVNIYQLGYEAAKALVDKVENAEST-AKCIIIPHKLLKRQTCEGHH---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K4H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177012 for 2368 contacts (-74.8/contact) +
2D Compatibility (PS) -29894 + (NN) -15343 + (LL) 5116
1D Compatibility (HY) -20400 + (ID) 4300
Total energy: -241833.0 ( -102.13 by residue)
QMean score : 0.481
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