Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLLYIFEKNIILRKILITFSLIIIFLLGRYVPIPGVLISAYK-----GQDNNFATLYSTVTGGNLSQVGVFSLGIGPMMTTMILLR-LFTIGKYSSGVSQKVQQFRQ------NVVMLVIAIIQGLAIAISFQYHNG--FSLTKL-------LLATMILVTGAYIISWIGNLNAEYGFG-GMTILVVVGMLVGQFNNIPLIFELFQDGYQ--LAIILFLLWTLVAMYLMITFERSEYRIPVM--RTSIHNRLV--DDAYMPIKVNASGGMAFMYVYTLLMFPQYIIILLRSIFPTNPDITSYNDYFSLSSIQGVVIYMILMLVLSVAFTFVNIDPTKISEAMRESGDFIPNYRPGKETQSYLSKICYLFGTFSGFFMAFLGGVPLLFALGNDDLRTVSSMTGIFMMITGMSFMILDEFQVIRIRKQYTSVFENEEN |
| 2ZJS Chain:Y ((16-382)) | -------------QRVLFTLLVLAAYRLGAFIPTPGVDLDKIQEFLRTAQGGVFGII-NLFSGGNFERFSIFALGIMPYITAAIIMQILVTVVPALEKLSKEGEEGRRIINQYTRIGGIALGAFQGFFLATAFLGAEGGRFLLPGWSPGPFFWFVVVVTQVAGIALLLWMAERITEYGIGNGTSLIIFAGIVVEWLPQILRTIGLIRTGEVNLVAFLFFLAFIVLAFAGMAAVQQAERRIPVQYAR-------YGGQATYIPIKLNAAGVIPIIFAAAILQIP----IFLAAPFQDNPVLQGIANFFNPTRPSGLFIEVLLVILFTYVYTAVQFDPKRIAESLREYGGFIPGIRPGEPTVKFLEHIVSRLTLWGALFLGLVTLLPQIIQNLTGIHSIAFSGIGLLIVVGVALDTLRQVESQLMLR------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZJS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -298168 for 2398 contacts (-124.3/contact) +
2D Compatibility (PS) -35078 + (NN) -10907 + (LL) 3632
1D Compatibility (HY) -35200 + (ID) 4650
Total energy: -380371.0 ( -158.62 by residue)
QMean score : 0.320
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