Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MACIIRRARLGDEVNLAYIQTESWKAAFGKILPEDIIQKTTEIEPAITMYQQLLHKEVGKGYILEVDSNPH---CMAWWDKSREDGMLDY-AELICIHSLKEGWGKGYGSQMMNHVLSEIQQAGYNKVILWVFTENTRARKFYDRFGFSFKGKSKTYFEKEEMCYEKILH
1WK4 Chain:A ((3-144))
----IRRAGLEDLPGVARVLVDTWRATYRGVVPEAFLEGLS-YEGQAERWAQRLKTPTWPGRLFVAESESGEVVGFAAFGPDRASGFPGYTAELWAIYVLPTWQRKGLGRALFHEGARLLQAEGYGRMLVWVLKENPKGRGFYEHLGGVLLGEREIELGGAKLWEVAYGF
General information:
TITO was launched using:
RESULT:
Template:
1WK4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77417 for 941 contacts (-82.3/contact) +
2D Compatibility (PS) -15120 + (NN) -4896 + (LL) 716
1D Compatibility (HY) -8800 + (ID) 1950
Total energy: -107467.0 ( -114.21 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_1WK4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WK4-query.scw
PDB file :
Tito_Scwrl_1WK4.pdb
: