Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGKKILIIEDEKNLARFVSLELLHEGYDVVVETNGREGLDTALEKDFDLILLDLMLPEMDGFEITRRLQAEKTTYIMMMTARDSVMDIVAGLDRGADDYIVKPFAIEELLARVRAIFRRQEIETKTKEKGDSGSFRDLSLNTHNRSAMRGDEEISLTKREFDLLNVLMTNMNRVMTREELLEHVWKYDVAAETNVVDVYIRYLRGKIDIPGRESYIQTVRGMGYVIREK
3RJP Chain:A ((134-228))
--------------------------------------------------------------------------------------------------------------------------------------YRDLVLNPQNRSVNRGDDEISLTKREYDLLNILMTNMNRVMTREELLSNVWKYDEAVETNVVDVYIRYLRGKIDIPGKESYIQTVRGMGYVIREK
General information:
TITO was launched using:
RESULT:
Template:
3RJP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67907 for 636 contacts (-106.8/contact) +
2D Compatibility (PS) -10258 + (NN) -5602 + (LL) 11032
1D Compatibility (HY) -13200 + (ID) 4050
Total energy: -89985.0 ( -141.49 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_3RJP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RJP-query.scw
PDB file :
Tito_Scwrl_3RJP.pdb
: