Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGRKWANIVAKKTAKDGANSKVYAKFGVEIYVAAKQGEPDPESNSALKFVLDRAKQAQVPKHVIDKAIDKAKGNTDETFVEGR-YEGFGPNGSMIIVDTLTSNVNRTAANVRTAYGKNGGNMGASGSVSYLFDKKGVIVFAGDDADTVFEQLLEADVDVDDVEAEEGTITVYTAPTDLHKGIQALRDNGVEEFQVTELEMIPQSEVVLEGDDLETFEKLIDALESDDDVQKVYHNVADF |
| 1KON Chain:A ((6-235)) | ---KWANTRHRKAAQDAKRGKIFTKIIRELVTAAKL-----DANPRLRAAVDKALSNNMTRDTLNRAIARG------ANMETIIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVISFEKGDEDTIMEAALEAGAE-DVVTYDDGAIDVYTAWEEMGKVRDALEAAGLKA-DSAEVSMIPSTKADMDAETAPKLMRLIDMLEDCDDVQEVYHNGEIS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KON.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24301 for 1669 contacts (-14.6/contact) +
2D Compatibility (PS) -23973 + (NN) -13665 + (LL) -72
1D Compatibility (HY) -12400 + (ID) 4450
Total energy: -78861.0 ( -47.25 by residue)
QMean score : 0.465
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