Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIYKVFYQETKERNPRREQTKTLYVTIDAANELEGRIAARKLVEENTAYNIEFIELLSDKHLEYEKETGVFELTEF
1RSS Chain:A ((85-123))
------YQVPMEVSPRRQQSLALRWLVQAANQRPERRAAVRIAHELMDAAEGKGGAVKKKEDVERMAEAHYRW---
General information:
TITO was launched using:
RESULT:
Template:
1RSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9176 for 177 contacts (51.8/contact) +
2D Compatibility (PS) -4006 + (NN) 1870 + (LL) 1008
1D Compatibility (HY) -400 + (ID) 750
Total energy: 6898.0 ( 38.97 by residue)
QMean score : 0.279
(partial model without unconserved sides chains):
PDB file :
Tito_1RSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RSS-query.scw
PDB file :
Tito_Scwrl_1RSS.pdb
: