Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEITAKLVKELREKSGAGVMDAKKALVETDGDLDKAIELLREKGMAKAAKKADRVAAEGLTGVYVDGNVAAVIEVNAETDFVAKNDQFVTLVNETAKVIAEGRPSNNEEALALTMPSGETLEQAFVTATATIGEKISFRRFALVEKTDEQHFGAYQHNGGRIGVITVVEGGDDALAKQVSMHVAAMKPTVLSYTELDAQFVHDELAQLNHKIEQDNESRAMVNKPALPFLKYGSKAQLTDEVIAQAEEDIKAELAAEGKPEKIWDKIVPGKMDRFMLDNTKVDQEYTLLAQVYIMDDSKTVEAYLESVNAKAVAFVRFEVGEGIEKASNDFEAEVAATMAAALEK |
| 3MMP Chain:A ((4-278)) | ---ITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKSGAIKAAKKAGNVAADGVIKTKIDGNYGIILEVNCQTDFVAKDAGFQAFADKVLDAAVAGKITDVEVLKA-------QFEEERVALVAKIGENINIRRVAALEG---DVLGSYQH-GARIGVLVAAKGADEELVKHIAMHVAASKPEFIKPEDVSAEVVEKEY---------------------------------------QVQLDIAMQ---SGKPKEIAEKMVEGRMKKFT-------GEVSLTGQPFVMEPSKTVGQLLKEHNAEVTGFIRFEVGEGIEKVETDFAAEVAAMSKQSKPH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MMP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94069 for 2080 contacts (-45.2/contact) +
2D Compatibility (PS) -30549 + (NN) -18750 + (LL) 4244
1D Compatibility (HY) -16800 + (ID) 6400
Total energy: -162324.0 ( -78.04 by residue)
QMean score : 0.532
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