Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIENYCQDYCLETIFPKHYFKDLQVITLTAGQSVCKQGEQLEYLHYIVKGRFKIVRRLFNGKEHILDIKTKPTLIGDIELLTNRQIVSSVIALEDLTVIQLSLKGRKEKLLTDATFLLKLSQELAQAFHDQNIKASTNLGYTVKELLASHILAIEEQGYFQLELSSLADSFGVSYRHLLRVIHDMVKEGLIQKEKPKYFIKNRFALESLNIQP
3MZH Chain:A ((25-183))
---------------------KQLQPVDFPRGHTVFAEGEPGDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVRAVSMD----RDALRSWIADRPEISEQLLRVLARRLRRTNNNL---------ADLIFTDVPGRVAKQLLQLAQRFGTQEGGALRVTHDLTQEEIAQLVGASRETVNKALADFAHRGW
General information:
TITO was launched using:
RESULT:
Template:
3MZH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55331 for 1027 contacts (-53.9/contact) +
2D Compatibility (PS) -16910 + (NN) -1554 + (LL) 2556
1D Compatibility (HY) -5200 + (ID) 1950
Total energy: -78389.0 ( -76.33 by residue)
QMean score : 0.387
(partial model without unconserved sides chains):
PDB file :
Tito_3MZH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MZH-query.scw
PDB file :
Tito_Scwrl_3MZH.pdb
: