Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYSFEELLATMTLITAAEIEDKIDSNQDFVLFIGRISCPFCHLFVPKIVEVADEDEFELFHLDSEDFDHWTANKEFRNKYDIPTVPGLMVVKNGTIKVKCDSKMTKEEIREFIG
1ZMA Chain:A ((14-117))
----------LEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPTVPGFVHITDGQINVRCDSSMSAQEIKDFAG
General information:
TITO was launched using:
RESULT:
Template:
1ZMA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80479 for 775 contacts (-103.8/contact) +
2D Compatibility (PS) -11598 + (NN) -5063 + (LL) 1160
1D Compatibility (HY) -6800 + (ID) 1700
Total energy: -104480.0 ( -134.81 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_1ZMA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZMA-query.scw
PDB file :
Tito_Scwrl_1ZMA.pdb
: