Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKSLISNLILINSITLFLGFYLIYFSVNYVIKDYVHQMTRNSMQANFTILDSIYNNKKIPDENMVNQDSIFVWSYYAIFDQHYRMKYGTDNHKKESHDIIRYLTQKRLWQISKEKDGMFVTIKKKTYYVMTKDYSGILVDGSIKKVPKAQSQLFHVINFSDITYTQHLITKINHFLIVILVLTYIPMLFIMRKTFTGIRESIQSVQTYISSLWKNQGNHQSSQKEIVFSDFDPLLLESQEMANRIYQAEESQRNFFQNASHELRTPLMSIQGYTEGVQEGIIDAELAHSVI---LQESKKMKQLVDDIILLSKLDSNLSDQKDEFS-LNELLNSIIAYFKPLANKQKISITYR-----PDKHEKLLKGNEELIQRAINNILSNALRYAVSHIEISYTNQK------LTISNDGPAISKEDLPYIFDRFY------KGHGGQTGIGLAMTKEIIKQHHGNIIAES-DSTSTTFTIYFNCHKIA |
| 4I5S Chain:A ((211-429)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FVSNVSHELRTPLTSVKSYLEALDDGALTESVAPSFIKVSLDETNRMMRMITDLLSLSR-----SHLDVELTNFTAFMNYILDRFDQIQSQQST----EIIRDYPDKSVWIEIDTDKMTQ-VIDNILNNAIKYSPDGGKVTITMQTTDTQLILSISDQGLGIPKKDLPLIFDRFYRVDKAR-------GLGLAIAKEIVKQHKGFIWANSEEGEGSTFTIVLP----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40572 for 1300 contacts (-31.2/contact) +
2D Compatibility (PS) -18567 + (NN) -1569 + (LL) 21308
1D Compatibility (HY) -17600 + (ID) 3750
Total energy: -60750.0 ( -46.73 by residue)
QMean score : 0.350
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