Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGFTDETVRFRLDDSNKVEISETLTAVYRSLEEKGYNPINQIVGYVLSGDPAYVPRYNDARNQIRKYERDEIVEELVRYYLQGNGIDL
4Z17 Chain:A ((220-274))
-----------------------LQLIMEAIEKAGYRPGEQI---VIALDPATTEIFEDGKYHLKREGRSLSSAEMVDYWVDLVNRYP
General information:
TITO was launched using:
RESULT:
Template:
4Z17.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9213 for 254 contacts (-36.3/contact) +
2D Compatibility (PS) -5865 + (NN) -4329 + (LL) 1544
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -22263.0 ( -87.65 by residue)
QMean score : 0.184
(partial model without unconserved sides chains):
PDB file :
Tito_4Z17.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Z17-query.scw
PDB file :
Tito_Scwrl_4Z17.pdb
: