Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVIFLQDVKGKGKKGEVKEVPTGYAQNFLLKKNLAKEATTQAIGELKGKQKSEEKAQAEILAQAKELKTQLESETTRVQFIEKVGPDGRTFGSITAKKIAEELQKQYGIKIDKRHIDLDHTIRAIGKVEVPVKLHKQVSSQIKLDIKEA
487D Chain:K ((1-147))
MKVIFLKDVKGKGKKGEIKNVADGYANNFLFKQGLAIEATPANLKALEAQKQKEQRQAAEELANAKKLKEQLEKLT--VTIPAKAGEGGRLFGSITSKQIAESLQAQHGLKLDKRKIELADAIRALGYTNVPVKLHPEVTATLKVHVTEQ
General information:
TITO was launched using:
RESULT:
Template:
487D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40525 for 954 contacts (-42.5/contact) +
2D Compatibility (PS) -16430 + (NN) -6533 + (LL) 152
1D Compatibility (HY) -12800 + (ID) 4050
Total energy: -80186.0 ( -84.05 by residue)
QMean score : 0.513
(partial model without unconserved sides chains):
PDB file :
Tito_487D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-487D-query.scw
PDB file :
Tito_Scwrl_487D.pdb
: