Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSITSVKKSKPFKLGVAGLLVGASLALPLSVSAASYTVKSGDTLSAIAKNHKTTVQELVSLNSISNADVISIGDVLKLDNSKASQAEAKSQPTIENSMNSSSNLSSSDSAAKEEIARRESNGSYTAQNGQYYGRYQLSQSYLNGDLSPENQEKVADNYVVSRYGSWSAALSFWNSNGWY
4UZ2 Chain:A ((3-56))
---------------------------------ATYTVAPGDTLYSIARRYGTTVEELMRLNGLESF-LLQPGQVLKLPSRERTHVVAPGDTLFSLARRYGTTVEALMRLNGLSSPEIKVGQVLRLPEEGEA-----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4UZ2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17614 for 300 contacts (-58.7/contact) +
2D Compatibility (PS) -5800 + (NN) -1734 + (LL) 3816
1D Compatibility (HY) -5200 + (ID) 1150
Total energy: -27682.0 ( -92.27 by residue)
QMean score : 0.768
(partial model without unconserved sides chains):
PDB file :
Tito_4UZ2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UZ2-query.scw
PDB file :
Tito_Scwrl_4UZ2.pdb
: