Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITKEQYFYFRQLDDFKHFTIEQFDHIVSHIKHRTALKNHTLFFEGDYREKLFLIQSGHVKIEQSDASGSFIYTDYVRQGTVFPYGGLFLDD--DYHFSAVAITDIEYFSLPMALYEEYSLQNINQMKHLCRKYSKLLRVHEIRLRNMVTSSASMRVIQSLATLL--LQVPTERG-HLPFPITTIEIANMSGTTRETVSHVLKELRQKDIVEMKGKKLLYNNKNYFKKFIE
3LA2 Chain:A ((50-230))
-------------------------------------RNKTIFFPGDPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFGVLSLLTGNKSDRFYHAVAFTPVELLSAPIEQVEQALKENPELSMLMLRGLSSRILQTEMMIETLAHRDMGSRLVSFLLILCRDFGVPCADGITIDLKLSHQAIAEAIGSTRVTVTRLLGDLREKKMISIHKKKITVHKPVTLSR---
General information:
TITO was launched using:
RESULT:
Template:
3LA2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77264 for 1235 contacts (-62.6/contact) +
2D Compatibility (PS) -19514 + (NN) -8936 + (LL) 3780
1D Compatibility (HY) -13600 + (ID) 2400
Total energy: -117934.0 ( -95.49 by residue)
QMean score : 0.409
(partial model without unconserved sides chains):
PDB file :
Tito_3LA2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LA2-query.scw
PDB file :
Tito_Scwrl_3LA2.pdb
: