Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQHTLLPKKTERLQYFGSVSPIKGEKPVEKEKMKDLQNIRKDYFFDIQHVGVANVSHPVTITSAMMPAEQTTAANFTMTCNLPRNQKGINMSRLTELLQVYHQNGWILSFSSLQQFTKELAENMDTSSATVEVRFPWFFERKSPKLEKAGLMHADIFMSVTYRKDQPFKQRAGISAKVTTLCPCSKEISEYSAHNQRGTVSIWADIHPAASLPSDVKA---DLLHAAESNASARLHPVLKRPDEKAVTETAYENPRFVEDLARLIAADLFELEWVSAFEIECRNEESIHLHDAYAKLCFSKEVDKI
3D2O Chain:A ((14-256))-------------------------------------------RNLPINQVGIKDLRFPITLKTA--EGTQSTVARLTMTVYLPAEQKGTHMSRFVALME---QHTEVLDFAQLHRLTAEMVALLDSRAGKISVSFPFFRKKTAPVSGIRSLLDYDVSLT-GEMKDGAYGHSMKVMIPVTSLCPCSKEISQYGAHNQRSHVTV--------SLTSDAEVGIEEVIDYVETQASCQLYGLLKRPDEKYVTEKAYENPKFVEDMVRDVATSLIADKRIKSFVVESENFESIHNHSAYAYIAY-------


General information:
TITO was launched using:
RESULT:

Template: 3D2O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1197 -100779 -84.19 -419.91
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -84.19
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.333

(partial model without unconserved sides chains):
PDB file : Tito_3D2O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3D2O-query.scw
PDB file : Tito_Scwrl_3D2O.pdb: