Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSGKASIKDLAVGKGKDLRWGKGLNAVGVFTDLEIGRQREMSAKSCSTPLYIRRSIQFKS
5C5V Chain:A ((115-143))------------------------------FRDLETGRERQVSPWH-DIPLYVRDLVRTK-


General information:
TITO was launched using:
RESULT:

Template: 5C5V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 19 1020 53.68 35.17
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 53.68
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.515

(partial model without unconserved sides chains):
PDB file : Tito_5C5V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5C5V-query.scw
PDB file : Tito_Scwrl_5C5V.pdb: