Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKRNRWWIILLLFLVFLPKTSFAHAYIVKSSPGENSELKSAPAQVEIEFNEPVEEGFHYIKVYNSNGDRVDTDKTEIKK-----DNHHIMTVKLKKNLPKDVYRAEWNAVSADGHPVSGVIPFSIGKADGGFSSQKAADSALNPGTAADRAILYTALSLFIGTVFFHLFWYKGKSEQLVKRTRRILTGSIAALGLALLLQLPIQTKANAGGGWGSAFQPGYIRETLFETAGGSIWIIQAALFVLLALSVIPAIRKNRFSSFGYWTAPLIFFFGLLLAKAFTGHAAVVEEKTVGILMDFLHLTSASIWVGGIAALVLLLSKEWRQPDKTLAWETVRRFSPWALTAVGVILFSGLLNGFFIIRSMDSLFHTAYGQALLVKSGLFVFMLVLGAIHFLLTRKQRRTGISRTLKAEWAIGIAVLITAAVFTSLPSPPEPAPEPFYQTKAIENGQSVSLSISPNQPGKNVFELRVTDHNGDPVKNIQQITLTVYKTGLSGSENKSTFTLKEKTKGVFQDQNLSINEKGNWKIKVHGLTGDFNEINIMFTKTN
1M42 Chain:A ((1-101))-----------------------HPKLVSSTPAEGSE-GAAPAKIELHFSENLVTQFSGAKLVMTAMPGMEHSPMAVKAAVSGGGDPKTMVITPASPLTAGTYKVDWRAVSSDTHPITGSVTFKV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1M42.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 419 -25133 -59.98 -261.80
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.49

3D Compatibility (PKB) : -59.98
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.49
QMean score : 0.548

(partial model without unconserved sides chains):
PDB file : Tito_1M42.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1M42-query.scw
PDB file : Tito_Scwrl_1M42.pdb: