Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLIRNPFKDKYYSHDRRALNMLALRVPGLAFILMIYIASIVLQFVSGGWSILLLYAFTILIAIFALLHWHSYRWVKKRVILYFAVQGLITFALANLMTGFFILVIIGLYAFLIGQIIGMADRRRTFLILYLLLLLVINSAYHLHKGEVLHFIVIAAPIMIVIITYAATFFAQVDEKIKAQLTLERLELAHQQVEQLTLQNERQRMARDLHDTLAQGLVSLNMQLDAIHVHLAKGNTERAKEI--IQQSMKRVKSTIADARSAIDDLRSKSEEIGVLKERITSLMDHFIESTG-MACLLDYRLHQVLDVRTAENCYYIIGECMTNAAKHAEAKTIWISI---WDDEKGRLHLTVKDNGKGFDVEKGKKKRGHYGLLGIQERVRAINGQFNIKSTKLKGTQIEITVPIQGEMQDE
3GIG Chain:A ((15-214))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ANERIAELVKLEERQRIARDLHDTLGQKLSLIGLKSDLARKLIYKDPEQAARELKSVQQTARTSLNEVRKIVSSMKGIRLKDELINI---------KQILEAADIMFIYEEEKWPENISLLNENILSMCLKEAVTNVVKHSQAKTCRVDIQQLWKE----VVITVSDDGT-FKGEENSFS--H-GLLGMRERLEFANGSLHIDTE--NGTKLTMAIP--------


General information:
TITO was launched using:
RESULT:

Template: 3GIG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 609 -62635 -102.85 -326.22
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -102.85
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.300

(partial model without unconserved sides chains):
PDB file : Tito_3GIG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GIG-query.scw
PDB file : Tito_Scwrl_3GIG.pdb: