Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMERYDELKKGESGALVSIAAYLVLSAIKLIIGYLFHSEALTADGLNNTTDIIASVAVLIGLRISQKPPDEDHPYGHFRAETIASLIASFIMMVVGLQVLFSAGESIFSAKQETPDMIAAWTAAGGAVLMLIVYRYNKRLAKKVKSQALLAAAADNKSDAFVSIGTFIGIVAAQFHLAWIDTVTAFVIGLLICKTAWDIFKESSHSLTDGFDIKDISAYKQTIEKISG----VSRLKDIKARYLGSTVHVDVVVEVSADLNITESHDIANEIERRMK-----EEHAIDYSHVHMEPLEQK
3J1Z Chain:P ((6-296))--QYDFWVKLASRA--SVATALTLITIKLLAWLYSGSASMLASLTDSFADTLASIINFIAIRYAIVPADHDHRYGHGKAEPLAALAQSAFIMGSAFLLLFYGGERLLNPSPVENATLGVVVSVVAIVLTLALVLLQKRALAATNSTVVEADSLHYKSDLFLNAAVLLALVLSQYGWWWADGLFAVLIACYIGQQAFDLGYRSIQALLDRELDEDT---RQRIKLIAKEDPRVLGLHDLRTRQAGKTVFIQFHLELDGNLSLNEAHSITDTTGLRVKAAFEDAEVIIHQDPVQVEPTTQ-


General information:
TITO was launched using:
RESULT:

Template: 3J1Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain P - contact count / total energy / energy per contact / energy per residue : 1164 -94953 -81.57 -336.71
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain P : 0.76

3D Compatibility (PKB) : -81.57
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.268

(partial model without unconserved sides chains):
PDB file : Tito_3J1Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3J1Z-query.scw
PDB file : Tito_Scwrl_3J1Z.pdb: