Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKWSELSIHTTHEAVEPISNILHEAGASGVVIEDPLDLIKERENVYGEIYQLDPNDYPDEGVIVKAYLPVNSFLGETVDGIKETINNLLLYNIDLGRNHITISEVNEEEWATAWKKYYHPVKISEKFTIVPTWEEYTPVHTDELIIEMDPGMAFGTGTHPTTVLCIQALERFVQKGDKVIDVGTGSGILSIAAAMLEAESVHAYDLDPVAVESARLNLKLNKVSDIAQVKQNNLLDGIEGEHDVIVANILAEVILRFTSQAYSLLKEGGHFITSGIIGHKKQEVKEALEQAGFTIVEILSMEDWVSI-IAKK
3GRZ Chain:A ((1-196))-------------------------------------------------------------------------------------------------------------------KYYHVINLSRHLAIVPEWEDYQPVFKDQEIIRLDPG-----GNHQTTQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIA-LQKTSLLADVDGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLKMRAGRWIGLAISRK


General information:
TITO was launched using:
RESULT:

Template: 3GRZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1070 -137668 -128.66 -724.57
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -128.66
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.601

(partial model without unconserved sides chains):
PDB file : Tito_3GRZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GRZ-query.scw
PDB file : Tito_Scwrl_3GRZ.pdb: