Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVVVEKTPTTLPQATPNGAAPWHVRAGAFAIDVLPGLAVAATMALTALTVPPGSAWRWLCACLLGLTILLLAVNRLLLPTITGWSLGRALTGIRVVRRDGSAIGPWRLLVRDLAHLVDTLSLFVGWLWPLWDSRRRTFADLLLRTEVRRVEPVQRPAVIRRLTAAVALAAAGACASATAVGAAVVYVNEWQTDHTRAQLATRGP--KLVVDVLSYDPETVQRDFERARSLATDRYRPQLSIQQDSVRESGPVRNQYWVTDSAVLSATPAQATMLLFMQGERGTPPNQRYIQSTVRAIFQKSRGQWRLDDLAVVMKPRQPTGEK |
1V5B Chain:A ((149-196)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RGPGENEVVDTLAYTREEIERIIEKAFQLAQIRRKKLASVDKANVLES-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V5B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7827 for 169 contacts (46.3/contact) +
2D Compatibility (PS) -5044 + (NN) -1654 + (LL) 22168
1D Compatibility (HY) -2000 + (ID) 950
Total energy: 20347.0 ( 120.40 by residue)
QMean score : 0.494
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