Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAPVNVISVAVVASDPLTRDGALARLSSHRELDVRAWQAGCETSVLLVLATTITAPLLCQIEDVQKDGPSHAPKLVVVADEFSAEQVF-RMIKLGLTGLLYRSQSTFDCIVETIRLSAEGRLRLPERVQRYLVGRIKSTPTAEPDTPCAAALAEREVAVLRLLADGLSTHQVAVQLNYCERTIKNIVHDIVTRLKLRNRTHAVAHALRAGLI
4HYE Chain:A ((77-199))
---------------------------------------------------------------------------VVVVTTFKRAGYFERAVKAGVDAYVLKERSIAD-LMQTLHTVLEGRKEYSPELMEMVMTR--------PN-----PLTEQEIAVLKGIARGLSNQEIADQLYLSNGTIRNYVTNILSKLDAGNRTEAANIAKESGWL
General information:
TITO was launched using:
RESULT:
Template:
4HYE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82552 for 862 contacts (-95.8/contact) +
2D Compatibility (PS) -13039 + (NN) -5058 + (LL) 6484
1D Compatibility (HY) -10000 + (ID) 2050
Total energy: -106215.0 ( -123.22 by residue)
QMean score : 0.413
(partial model without unconserved sides chains):
PDB file :
Tito_4HYE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HYE-query.scw
PDB file :
Tito_Scwrl_4HYE.pdb
: